PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981988.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 335aa MW: 35832.7 Da PI: 9.5031

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	7.9e-39	78	137	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e l+cprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ss XP_024981988.1 78 EPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS 137 56789****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MVFSSVPPYL DHHNWHHQLQ QSNHQGSGGV GGGVGENPNL PPPPPPPQPG GGGGGGEGSI 60 RPGSMVDRAR LAKLPLPEPG LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGA 120 LRNVPVGGGC RRNKRSSKSR SSKSPSQSGP KSQSASPPRS SSENMTSNQL PHPPSLHLPF 180 MSSLGQYGGV GGNLSSSIGG FQPQSEMGNF QIGSGSSGGN NFNNILSMGG GENWRVPFLP 240 GFEVPNNNTN LFNYQNEGVI EAQSSSMVGG DMRLKSSGID NSQIDPPVKV EDNRALNLSR 300 QFLGMLENTN QQPWAGNSWA EFPGVSTSTP TTHFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-38	Dof family protein