PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024982209.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 137aa    MW: 14941.6 Da    PI: 6.9579
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024982209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.3e-212273256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp+++    r++lg+f taeeAa+a+++a+  ++g+
  XP_024982209.1 22 RYRGVRRRP-WGKYAAEIRDPNKQ--GVRVWLGTFATAEEAARAYDKAAFDMRGH 73
                    6********.**********9544..4*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MDHGGASKDS HAGGGGGGEE VRYRGVRRRP WGKYAAEIRD PNKQGVRVWL GTFATAEEAA  60
RAYDKAAFDM RGHMAVLNFP AEYPPTFSAA AYNANSTMAA TASSSSSMAT REVFEFECLD  120
DKLLEDLLGY DNTKHKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-15ERF family protein