PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024982219.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 261aa    MW: 30078.4 Da    PI: 4.9473
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024982219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.84.6e-2373134159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDgy+WrKYGqK ++ +++ rsYYrCt++   gC+++k+v++++++p+  +itY+g H+++
  XP_024982219.1  73 VDDGYAWRKYGQKAIHHTNHQRSYYRCTYKfdqGCEATKQVQKTDDEPSKYKITYNGYHTCK 134
                     59***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MFDNTFSVLS FSSINEISYN HTGDIQSSSN LGGQKSEDFN KNIKIEPQVE AKRRCCKRRK  60
IPWTSTKVTS TLVDDGYAWR KYGQKAIHHT NHQRSYYRCT YKFDQGCEAT KQVQKTDDEP  120
SKYKITYNGY HTCKNHLRGP EMIFDSSNLE DSSIILSFET KGLIDEKQVD SYFPSMKHDQ  180
PKEALFPLES TYSQSVLLQD GIRAEVFEPV SVELLEYEHQ EMISLETYLA GNDGYEIDNL  240
TLFDFSDNLL NNAQDELACC N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-28WRKY family protein