PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024982772.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 211aa    MW: 24374.9 Da    PI: 8.9188
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024982772.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.51.9e-2251135289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY++YA ++GF +r+ +s+ks+r+g+i++r + C  e +++++++      +++++ r gC a++ vk+ek g+w+v k++ eHnH+l
  XP_024982772.1  51 FYDDYAGRMGFVTRVLSSRKSERDGTIISRGLGCRGESENHKNESI---MVQKKNKGREGCMAMILVKREKPGNWVVRKFVREHNHPL 135
                     9*********************************999999888776...78888899*****************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDADKKQMLL EDDIEKLEVP VQGELSLCEA DKNQEPCEGM LFDSEEAARA FYDDYAGRMG  60
FVTRVLSSRK SERDGTIISR GLGCRGESEN HKNESIMVQK KNKGREGCMA MILVKREKPG  120
NWVVRKFVRE HNHPLHVSIS KRRPAFDEKD KRIQELTAEL RVKKRLSAAY REQLLALMKD  180
VDGHNEHIST KVQLVRNNLK KLEENGHIHH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-57FAR1 family protein