PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024982773.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 210aa    MW: 24303.8 Da    PI: 8.9188
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024982773.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.61.8e-2250134289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY++YA ++GF +r+ +s+ks+r+g+i++r + C  e +++++++      +++++ r gC a++ vk+ek g+w+v k++ eHnH+l
  XP_024982773.1  50 FYDDYAGRMGFVTRVLSSRKSERDGTIISRGLGCRGESENHKNESI---MVQKKNKGREGCMAMILVKREKPGNWVVRKFVREHNHPL 134
                     9*********************************999999888776...78888899*****************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDDKKQMLLE DDIEKLEVPV QGELSLCEAD KNQEPCEGML FDSEEAARAF YDDYAGRMGF  60
VTRVLSSRKS ERDGTIISRG LGCRGESENH KNESIMVQKK NKGREGCMAM ILVKREKPGN  120
WVVRKFVREH NHPLHVSISK RRPAFDEKDK RIQELTAELR VKKRLSAAYR EQLLALMKDV  180
DGHNEHISTK VQLVRNNLKK LEENGHIHHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-57FAR1 family protein