PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024982775.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 204aa    MW: 23557.9 Da    PI: 8.9264
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024982775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.61.7e-2244128289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY++YA ++GF +r+ +s+ks+r+g+i++r + C  e +++++++      +++++ r gC a++ vk+ek g+w+v k++ eHnH+l
  XP_024982775.1  44 FYDDYAGRMGFVTRVLSSRKSERDGTIISRGLGCRGESENHKNESI---MVQKKNKGREGCMAMILVKREKPGNWVVRKFVREHNHPL 128
                     9*********************************999999888776...78888899*****************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLLEDDIEKL EVPVQGELSL CEADKNQEPC EGMLFDSEEA ARAFYDDYAG RMGFVTRVLS  60
SRKSERDGTI ISRGLGCRGE SENHKNESIM VQKKNKGREG CMAMILVKRE KPGNWVVRKF  120
VREHNHPLHV SISKRRPAFD EKDKRIQELT AELRVKKRLS AAYREQLLAL MKDVDGHNEH  180
ISTKVQLVRN NLKKLEENGH IHHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-57FAR1 family protein