PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024982910.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 366aa MW: 39194 Da PI: 6.3547

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024982910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77.7	1.4e-24	272	334	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN++L++el++l++e+ kl+se+ XP_024982910.1 272 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVEVLSNENHSLRDELQKLSEECGKLTSEN 334 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGAGEQGSPA KHSKPTSTQE TPPPSYPDWS SSMQAYYGSG AAPPFFASTV ASSTPHPYMW 60 GGQHPMMPPY GTPVPYPALY PPAGVYGHPS MPMTASTAQP NAEMEAKAPN GKDRVPNKKS 120 KGTSGNANAN AIGVRTGESG KAASSSGNDG ATQSAESGND GSTDASDEDD QHEHSGGKKG 180 SFHQMLADDF ISAANARNSN SGSNVQTSVP GNPVVSMPTT NLNMGMDLWN PSAGTGSMKM 240 QPNHTGLSQT VVPPPMVGRE NMMADQWVQQ DERELKRQKR KQSNRESARR SRLRKQAECE 300 ELQARVEVLS NENHSLRDEL QKLSEECGKL TSENNSIKDE LTRYFGPEVV SKLDAHLQSQ 360 TDEGKS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGAGEQGSPA KHSKPTSTQE TPPPSYPDWS SSMQAYYGSG AAPPFFASTV ASSTPHPYMW  60
GGQHPMMPPY GTPVPYPALY PPAGVYGHPS MPMTASTAQP NAEMEAKAPN GKDRVPNKKS  120
KGTSGNANAN AIGVRTGESG KAASSSGNDG ATQSAESGND GSTDASDEDD QHEHSGGKKG  180
SFHQMLADDF ISAANARNSN SGSNVQTSVP GNPVVSMPTT NLNMGMDLWN PSAGTGSMKM  240
QPNHTGLSQT VVPPPMVGRE NMMADQWVQQ DERELKRQKR KQSNRESARR SRLRKQAECE  300
ELQARVEVLS NENHSLRDEL QKLSEECGKL TSENNSIKDE LTRYFGPEVV SKLDAHLQSQ  360
TDEGKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	295	RRSRLRK
2	289	296	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-105	bZIP family protein