PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024982913.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 361aa MW: 38660.4 Da PI: 6.5172

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024982913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77.8	1.4e-24	267	329	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN++L++el++l++e+ kl+se+ XP_024982913.1 267 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVEVLSNENHSLRDELQKLSEECGKLTSEN 329 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MGAGEQGSPA KHSKPTSTQE TPPPSYPDWS SSMQAYYGSG AAPPFFASTV ASSTPHPYMW 60 GGQHPMMPPY GTPVPYPALY PPAGVYGHPS MPMTASTAQP NAEMEAKAPN GKDRVPNKKS 120 KGTSGNANAN AIGVRTGESG KAASSSGNDG ATQSAESGND GSTDASDEDD QHEHSGGKKG 180 SFHQMLADAN ARNSNSGSNV QTSVPGNPVV SMPTTNLNMG MDLWNPSAGT GSMKMQPNHT 240 GLSQTVVPPP MVGRENMMAD QWVQQDEREL KRQKRKQSNR ESARRSRLRK QAECEELQAR 300 VEVLSNENHS LRDELQKLSE ECGKLTSENN SIKDELTRYF GPEVVSKLDA HLQSQTDEGK 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MGAGEQGSPA KHSKPTSTQE TPPPSYPDWS SSMQAYYGSG AAPPFFASTV ASSTPHPYMW  60
GGQHPMMPPY GTPVPYPALY PPAGVYGHPS MPMTASTAQP NAEMEAKAPN GKDRVPNKKS  120
KGTSGNANAN AIGVRTGESG KAASSSGNDG ATQSAESGND GSTDASDEDD QHEHSGGKKG  180
SFHQMLADAN ARNSNSGSNV QTSVPGNPVV SMPTTNLNMG MDLWNPSAGT GSMKMQPNHT  240
GLSQTVVPPP MVGRENMMAD QWVQQDEREL KRQKRKQSNR ESARRSRLRK QAECEELQAR  300
VEVLSNENHS LRDELQKLSE ECGKLTSENN SIKDELTRYF GPEVVSKLDA HLQSQTDEGK  360
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	284	290	RRSRLRK
2	284	291	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-108	bZIP family protein