PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024982915.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 336aa MW: 35958.1 Da PI: 6.1124

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024982915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	77.9	1.2e-24	242	304	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN++L++el++l++e+ kl+se+ XP_024982915.1 242 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVEVLSNENHSLRDELQKLSEECGKLTSEN 304 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MGAGEQGSPA KHSKPTSTQE TPPPSYPDWS SSMQAYYGSG AAPPFFASTV ASSTPHPYMW 60 GGQTASTAQP NAEMEAKAPN GKDRVPNKKS KGTSGNANAN AIGVRTGESG KAASSSGNDG 120 ATQSAESGND GSTDASDEDD QHEHSGGKKG SFHQMLADDF ISAANARNSN SGSNVQTSVP 180 GNPVVSMPTT NLNMGMDLWN PSAGTGSMKM QPNHTGLSQT VVPPPMVGRE NMMADQWVQQ 240 DERELKRQKR KQSNRESARR SRLRKQAECE ELQARVEVLS NENHSLRDEL QKLSEECGKL 300 TSENNSIKDE LTRYFGPEVV SKLDAHLQSQ TDEGKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	265	RRSRLRK
2	259	266	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	4e-81	bZIP family protein