PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024982916.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 300aa MW: 31718.9 Da PI: 9.4536

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024982916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.9	1.1e-08	272	297	1	26
XXXXCHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKka 26 e+elkr++rkq+NRe+ArrsR+RK+a XP_024982916.1 272 ERELKRQKRKQSNRESARRSRLRKQA 297 89***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGAGEQGSPA KHSKPTSTQE TPPPSYPDWS SSMQAYYGSG AAPPFFASTV ASSTPHPYMW 60 GGQHPMMPPY GTPVPYPALY PPAGVYGHPS MPMTASTAQP NAEMEAKAPN GKDRVPNKKS 120 KGTSGNANAN AIGVRTGESG KAASSSGNDG ATQSAESGND GSTDASDEDD QHEHSGGKKG 180 SFHQMLADDF ISAANARNSN SGSNVQTSVP GNPVVSMPTT NLNMGMDLWN PSAGTGSMKM 240 QPNHTGLSQT VVPPPMVGRE NMMADQWVQQ DERELKRQKR KQSNRESARR SRLRKQASRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	295	RRSRLRK
2	289	296	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-72	bZIP family protein