PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983017.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 189aa    MW: 20940.7 Da    PI: 8.8919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-18555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  XP_024983017.1  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRIWLGTFETAEAAARAYDQAAILMNG 55
                    59*****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MVQSKKFRGV RQRQWGSWVS EIRHPLLKRR IWLGTFETAE AAARAYDQAA ILMNGQSAKT  60
NFPVMTNKNS SGDNHHSPSS QIEIPVDTLA AKLRKCCKDP SPSLTCLRLD SDNSHIGVWQ  120
KRPGKGSGSG WVMKVELGGK RKEGPPPSPV VDEGGGSGDE EIDEENRVVM QMIEELLNWN  180
STPPSFPFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.24e-61ERF family protein