PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024983294.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 374aa MW: 41812.3 Da PI: 6.2625

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024983294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.7	1e-07	210	252	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k ++r NR +A rs +RK +i+eLe+kv+ L++e ++ XP_024983294.1 210 KHAKRIWANRQSAARSKERKMRYIAELERKVQILQTEASSCSA 252 77899999***************************99876555 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MEKDESQNLN GSLLPPSGWN SGFPLDGNKD NEKSEPNGST MVPTNCDESD QLTHDLSRML 60 DHPPKYLGHR RALSEIVTLP DDISFDRDLG VVGGFNGPSY SDETEEDLLS MYLDHMDKLN 120 NSSATSGSQV GESSFSAVQN SQTAATPPAS PPPENHVTSI RVKHQHSMSM DGSAIKPEML 180 NSGSEEISST DAKKSISDAK LAELALVDPK HAKRIWANRQ SAARSKERKM RYIAELERKV 240 QILQTEASSC SAQLALLQRD TNGLAAENNE LKLRLQTMKQ QIHMQDGQNL MNGGSMMNFR 300 QSFGANYQFH PSNHAMNTQQ FQQLQNQHPF EQQQLPLLHQ IQQHPFQEQQ LLQIQQKHQH 360 PYPQQPGHRS SLST

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MEKDESQNLN GSLLPPSGWN SGFPLDGNKD NEKSEPNGST MVPTNCDESD QLTHDLSRML  60
DHPPKYLGHR RALSEIVTLP DDISFDRDLG VVGGFNGPSY SDETEEDLLS MYLDHMDKLN  120
NSSATSGSQV GESSFSAVQN SQTAATPPAS PPPENHVTSI RVKHQHSMSM DGSAIKPEML  180
NSGSEEISST DAKKSISDAK LAELALVDPK HAKRIWANRQ SAARSKERKM RYIAELERKV  240
QILQTEASSC SAQLALLQRD TNGLAAENNE LKLRLQTMKQ QIHMQDGQNL MNGGSMMNFR  300
QSFGANYQFH PSNHAMNTQQ FQQLQNQHPF EQQQLPLLHQ IQQHPFQEQQ LLQIQQKHQH  360
PYPQQPGHRS SLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-113	bZIP family protein