PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983409.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 260aa    MW: 28865.9 Da    PI: 9.0356
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.67.4e-402483261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    k++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk++
  XP_024983409.1 24 KQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRV 83
                    7899******************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEKPIVIDRY QEQQQQQQQR QHQKQQALKC PRCDSSNTKF CYYNNYSLSQ PRHFCKACKR  60
YWTRGGTLRN VPVGGGCRKN KRVKVPPTTA ATTHVASTSQ PVDHNPNLDH LSLVYGLAPQ  120
NPNYQRCNTL VSGYDFSQPQ MSDLGLRFSP SDPGAGVVIN HAHNSSSFFS SYPSSMFSGS  180
TSSSTTSAPI MASILASGFQ QQQRFMDWSN HFQGQTNNND QLEAMASSNQ NPLLWNTQTS  240
GGGGWFDPTS NIDSSVPSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.25e-35Dof family protein