PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983535.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 137aa    MW: 15156.4 Da    PI: 10.1726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.7e-0633721054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ ++++ L++l+ +      +K + a++L +A+eYI+ L
  XP_024983535.1 33 KERKEKVGERIAALQQLVSPY-----GKTDTASVLLEAMEYIRFL 72
                    678889999*********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MMEHKRSPVS VEQGSLTSLT PKRHKAGLSI SSKERKEKVG ERIAALQQLV SPYGKTDTAS  60
VLLEAMEYIR FLHEQVKVLS APYLHNNSTA QSQEIDMYNL KSKGLRLVPI SYTMGVASSN  120
GADIWAPIKT NNNSPKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.32e-58bHLH family protein