PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024983550.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 288aa MW: 31804.3 Da PI: 7.0935

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024983550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.6	6.9e-34	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPk i+++m+vkgLtl+h+kSHLQkYR+ XP_024983550.1 42 KPRLRWTAELHERFVDAVTQLGGPDKATPKMIMRTMGVKGLTLYHLKSHLQKYRM 96 79****************************************************7 PP
2	Myb_DNA-binding	75.4	7.7e-24	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+k I+rtmg kg+tl+++ks++qky+ XP_024983550.1 44 RLRWTAELHERFVDAVTQLGGPdkaTPKMIMRTMGvKGLTLYHLKSHLQKYR 95 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MYSGIHSIPL EGTGIAHADF PRHLPTTNLV GDPCLVLTTD PKPRLRWTAE LHERFVDAVT 60 QLGGPDKATP KMIMRTMGVK GLTLYHLKSH LQKYRMGKQS CKEFMENSKD ASCIAESQDM 120 SSSTSSSTRM MAQDLNDGFE VTEALRVQME VQRRLHDQLE VQHRLQLRIE AQGKYLQSIL 180 EKACKALNDQ AITTAGLEAA REELSELAIK VANDCPLSVT PTPSLTQIAT HVENEHPPNS 240 TARLMDHSID SCLTSTAPPV GLSSQAAALK KRQRAMFTQA EWMAANIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-110	G2-like family protein