PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983612.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 125aa    MW: 14810.1 Da    PI: 10.5105
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.11.4e-111270361
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                    e k+ +r+++NRe+ArrsR +K++ ++ L + +  ++++ +++  ++e+++   a+ ++
  XP_024983612.1 12 ENKKMKRMISNRESARRSRMKKEKHMKDLNDQIFYFSKKKQEMVLNIERITTGHAATEM 70
                    6799***************************************9999998876665555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MSSKGHLMVN DENKKMKRMI SNRESARRSR MKKEKHMKDL NDQIFYFSKK KQEMVLNIER  60
ITTGHAATEM DNMVLRSQKQ ELEKRLEYAK SVCSRYGDVV QEPWVRPWEP SNSMRVMSSA  120
GFSNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12734RRSRMKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.12e-16bZIP family protein