PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983626.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 218aa    MW: 23851.4 Da    PI: 6.1249
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983626.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-174898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg++  +e+Aa+a++ a+++++g
  XP_024983626.1 48 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYRNPEMAARAHDVAALSIKG 98
                    68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MITSEPDDCS SNSFTSPSSS PGSTTQPQNP KTRSATIKRS RDTSTKHPVY RGVRMRNWGK  60
WVSEIREPRK KSRIWLGTYR NPEMAARAHD VAALSIKGNS AIINFPDLVG SLPRPVSSSP  120
RDVQAAAAKA AAMDKFDFPP APSTVSSEEL SEITELPILG PSVDSAESSN EFIYIDSVVD  180
GWLYPPQWMH NGADDDGGHV SGQKNAASND FEPILWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-59ERF family protein