PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983627.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 164aa    MW: 17999.1 Da    PI: 4.6564
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.95.7e-142441055
             AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++g+Wv+eIr+p++   + r++lg++  +e+Aa+a++ a+++++g
  XP_024983627.1  2 RNWGKWVSEIREPRK---KSRIWLGTYRNPEMAARAHDVAALSIKG 44
                    57**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MRNWGKWVSE IREPRKKSRI WLGTYRNPEM AARAHDVAAL SIKGNSAIIN FPDLVGSLPR  60
PVSSSPRDVQ AAAAKAAAMD KFDFPPAPST VSSEELSEIT ELPILGPSVD SAESSNEFIY  120
IDSVVDGWLY PPQWMHNGAD DDGGHVSGQK NAASNDFEPI LWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-50ERF family protein