PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983758.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 180aa    MW: 18734.9 Da    PI: 4.6174
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-191869155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr+++++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  XP_024983758.1 18 PKYRGVRQRRSSGKWVSEIREPK----SpNRIWLGTFPTPEMAAVAYDVAALALKG 69
                    79*******************93....578**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MSKSSETSPL ASSSGKHPKY RGVRQRRSSG KWVSEIREPK SPNRIWLGTF PTPEMAAVAY  60
DVAALALKGG DAELNFPNSA SSLPVPASSA PRDIQAAAAN AAAASGAAMD AFLGGYGGGG  120
AAAEPPVIGG DGFIDEDLIF DMPNVLANMA EGMLLSPPRY NYYVGEETGT GNSMDHDLWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.18e-37ERF family protein