PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983983.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 222aa    MW: 25812.6 Da    PI: 8.3205
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.31.4e-32148206159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  XP_024983983.1 148 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHTNCRVKKRVERLSEDCRMVITTYEGRHNHS 206
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEGSERGLAS FDLQVNSFSN PIHDHMGFPH FQDHHHHQSQ VLRFLPPTLS LPQLSQPPLH  60
TAATTTTTTS TTAAGNFNSD AHMVHRDSWH KEQVGSLDPK SVNEEKCTDD HNSWWRSSSN  120
PEKGRMKMRR KLREPRFCFQ TRSDVDVLDD GYKWRKYGQK VVKNSLHPRS YYRCTHTNCR  180
VKKRVERLSE DCRMVITTYE GRHNHSPCDD SNSSEHECFT SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.13e-66WRKY family protein