PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024984003.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 253aa    MW: 28946.4 Da    PI: 5.8222
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024984003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.52.3e-2889176291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+ +g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw++tk+++eH+H+l+p
  XP_024984003.1  89 FYNAYATRVGFVIRVSKLSRSRCDGTAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMVLVRKVSSGKWVITKFVKEHTHPLTP 176
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDFEVDDDVN SEELLNSADM EGRKGDEDGI VGCSIEGVFQ NNHDIKMDHD ESERGMLPLD  60
GAHTINDSLL VEEPYVGQEF ESEGAAHAFY NAYATRVGFV IRVSKLSRSR CDGTAIGRAL  120
VCNKEGFRMP DKREKIVRQR AETRVGCRAM VLVRKVSSGK WVITKFVKEH THPLTPGRGR  180
GDLIYDQYPN EHDKVRELSQ QLATEKRRSA TYKRHLEMIF EHIEEHNQSL SKKIQEIVNN  240
VNEIESNEIE TRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-95FAR1 family protein