PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024984784.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 159aa    MW: 18032.5 Da    PI: 9.8978
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024984784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-183383255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr ++ +g+++AeIrd + ng  kr++lg+f taeeAa a+++a  +++g
  XP_024984784.1 33 RYIGVRKRP-WGKFAAEIRDSTRNG--KRVWLGTFNTAEEAALAYDQASYSMRG 83
                    699******.**********44465..**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MALLTSSQQL NFEYFTYEEF ANADRKEGEK VRRYIGVRKR PWGKFAAEIR DSTRNGKRVW  60
LGTFNTAEEA ALAYDQASYS MRGVSSSLNF SVETVKESLK GIKCCSSKVE GSPAVALKEM  120
HKRRKKSSSL NSKEKKQRTN LLVLEDLGSD LLEELLSSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.14e-38ERF family protein