PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024985044.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 399aa MW: 45179 Da PI: 8.8421

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024985044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.4	1.3e-07	122	184	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke ++ rr NRe+Ar +R++a eeL++k++ L eNk Lk + e+ +ke ++lk+ + XP_024985044.1 122 EKEARKIRRVLANRESARQTIRRRQAIYEELTRKAADLAWENKNLKRKKEMASKEFDSLKDMN 184 7999*******************************************9999999999999866 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MADIKVLSSD NVAEEDRMVE IELEAAEALA ELAHVAANRF LTRGGESDSG NPCFNLVESF 60 PKHLFEQDQA NFCRKESEKT SIWTAKPVKD EQNAELPSTA SYPTKYASSS GRKSRQRLTE 120 AEKEARKIRR VLANRESARQ TIRRRQAIYE ELTRKAADLA WENKNLKRKK EMASKEFDSL 180 KDMNERLKAQ MVKVEADEIH GESRKSYDEL NTCSSSTNSP FIKCNWSPFL PLTITNSSSS 240 DKGVSTITNG ITSPLYVFPH PWLFAFLHND NEHHPRSFNL NEKPIESSQG SLHSSSSISK 300 ASMPIFPKMV EPETSCSTEA MPAKALDGTQ FGGPLTIESK TRSRNLINPV EHIIHEIHQV 360 PVVCSGKKLC DMAAASEARK RRKHLQRQKD LHWRQLRMH

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MADIKVLSSD NVAEEDRMVE IELEAAEALA ELAHVAANRF LTRGGESDSG NPCFNLVESF  60
PKHLFEQDQA NFCRKESEKT SIWTAKPVKD EQNAELPSTA SYPTKYASSS GRKSRQRLTE  120
AEKEARKIRR VLANRESARQ TIRRRQAIYE ELTRKAADLA WENKNLKRKK EMASKEFDSL  180
KDMNERLKAQ MVKVEADEIH GESRKSYDEL NTCSSSTNSP FIKCNWSPFL PLTITNSSSS  240
DKGVSTITNG ITSPLYVFPH PWLFAFLHND NEHHPRSFNL NEKPIESSQG SLHSSSSISK  300
ASMPIFPKMV EPETSCSTEA MPAKALDGTQ FGGPLTIESK TRSRNLINPV EHIIHEIHQV  360
PVVCSGKKLC DMAAASEARK RRKHLQRQKD LHWRQLRMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-33	bZIP family protein