PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024985245.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 481aa MW: 52181 Da PI: 4.9382

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024985245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.5	8.3e-40	149	209	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_024985245.1 149 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSA 209 7899******************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MSEGKDPAIK LFGKTIQLPD VLPVDGVFSQ DVDGGAAGCV KSEDRSSSST SSSEADSKGV 60 GKDREPDDDD DDDDDNKDPA EEKSVDKEED KAHSTISEEV TEPNATSMLN ENSKTPSAEN 120 ESAGAAKASK LEEEQSEMSN NQEKTLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC 180 KNCQRYWTAG GTMRNVPVGA GRRKNKTSAS QYRQITVTEA LPTELNHTVL KPNGTVLTFG 240 SDTPLCESMA SVLKIADKTL RQDSFRKAEE LIVPVNDDNG SRSSTAEMQN CHGFSPQVPC 300 FPGAPWPYPW NPQMGPAFCP PGFPMPFYPA APYWGCAVPV PGPGSWNMQW VPPPSGYHPA 360 PPSTYAAPPP SGPISPTLGK HSRDEKMVRS GDEASKENEG EKSLWIPKTL RIDDPDEAAK 420 SSIWATLGIK NERCVGVNGG GMFKAFQSKG GEVKKPLKEA SPALQANPAA LSRSLNFQEN 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MSEGKDPAIK LFGKTIQLPD VLPVDGVFSQ DVDGGAAGCV KSEDRSSSST SSSEADSKGV  60
GKDREPDDDD DDDDDNKDPA EEKSVDKEED KAHSTISEEV TEPNATSMLN ENSKTPSAEN  120
ESAGAAKASK LEEEQSEMSN NQEKTLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC  180
KNCQRYWTAG GTMRNVPVGA GRRKNKTSAS QYRQITVTEA LPTELNHTVL KPNGTVLTFG  240
SDTPLCESMA SVLKIADKTL RQDSFRKAEE LIVPVNDDNG SRSSTAEMQN CHGFSPQVPC  300
FPGAPWPYPW NPQMGPAFCP PGFPMPFYPA APYWGCAVPV PGPGSWNMQW VPPPSGYHPA  360
PPSTYAAPPP SGPISPTLGK HSRDEKMVRS GDEASKENEG EKSLWIPKTL RIDDPDEAAK  420
SSIWATLGIK NERCVGVNGG GMFKAFQSKG GEVKKPLKEA SPALQANPAA LSRSLNFQEN  480
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-104	Dof family protein