PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024985415.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family TCP
Protein Properties Length: 189aa    MW: 20693.2 Da    PI: 8.8966
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024985415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP371.2e-111031552583
             TCP  25 saecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 
                     + + aar+ +L +eL +   ++++ WLl+q++pai+ +tgt++ + +++      ssa+
  XP_024985415.1 103 PKLFAARIVQLKEELRLEDEGEAVKWLLKQSEPAIISATGTGTMPIMRS------SSAG 155
                     55679************************************77776433......2222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MNRSSSNNTS TGESGTHRWP PALPNAHQPP PPPPPHMGRN VRPRNMARRS LPTHEAQKRI  60
TNFGPYWLPS PYMTPDLVPY QLTPVRALAP EYSQTETTNL AVPKLFAARI VQLKEELRLE  120
DEGEAVKWLL KQSEPAIISA TGTGTMPIMR SSSAGHSNVR RGGPLVISAP LAGNDYDTDH  180
GESSTGDNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.16e-14TCP family protein