PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024985451.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 293aa MW: 31887.2 Da PI: 6.5116

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024985451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.1	2.3e-34	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl XP_024985451.1 42 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	78.1	1.2e-24	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ XP_024985451.1 44 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 95 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MYSGIHSISL DGTSMGHGDF SGQLDPTNFV GDPCLVLTTD PKPRLRWTAE LHERFVDAVT 60 QLGGPDKATP KTIMRTMGVK GLTLYHLKSH LQKYRLGKQS CKELTENSKD ASCIAESQDT 120 GSSTTSSTRM MPQDSNDGFQ VTEALRVQME VQRRLHEQLE VQRRLQLRIE AQGKYLQSIL 180 EKACKALNDQ AVATAGLEAA REELSELAIK VANECPPSVI PIPSLPEVAA YLENGIAPSV 240 DSCLTSNGSP VSPVGLSSQA AVLKKRQRAM FSNGGDSLPL DNSIRQAEWM MSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-115	G2-like family protein