PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024985489.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 512aa MW: 56838.6 Da PI: 7.0689

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024985489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.5	9.4e-11	208	244	4	40
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 +k rr+++NReAAr+sR+RKka++++Le L++ XP_024985489.1 208 VKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 244 6889*************************86655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MASHRVGETG LSDSGPSHHH HHHQHLPYSV FPAFNPPNTG FINQEGSAFD FGELEEAIVL 60 QGYKIHSDET KLPLYTTVPR PAATLDMFPS WPMRVHQTPR GSNSSTDSGS AVNAAIASKP 120 ETHSHIEAES PISSNSRKAS SDPQQQQQEA IYRQQLQNLQ IPTQQLEMES EGGSPVTTGG 180 SSHSQQAPKP FSEKKKGIGS TSEKPLDVKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI 240 RLTQLEQDLQ RARSQGMFLG GGGGGGNISS GAAIFDMEYT RWLDDDQRHM AELRKGLQSH 300 LSDGDLRVIV DSFVAHYDEI FQLKTVAAKS DVFHLITGMW TTPAERCFLW MGGFRPSELI 360 KMLSIQLDPL TEQQVVGIYS LQQSSQQAEE ALTQGLDQLH QSLVDTIASG SVNDGVHHMA 420 VALGKLTNLE GFVRQADNLR QQTLHQLHRI LTVRQAAKCF LVISEYYGRL RALSSLWASR 480 PREAMVSDEN SCQTTTDLQM VQSSHIHFSN FG

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MASHRVGETG LSDSGPSHHH HHHQHLPYSV FPAFNPPNTG FINQEGSAFD FGELEEAIVL  60
QGYKIHSDET KLPLYTTVPR PAATLDMFPS WPMRVHQTPR GSNSSTDSGS AVNAAIASKP  120
ETHSHIEAES PISSNSRKAS SDPQQQQQEA IYRQQLQNLQ IPTQQLEMES EGGSPVTTGG  180
SSHSQQAPKP FSEKKKGIGS TSEKPLDVKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI  240
RLTQLEQDLQ RARSQGMFLG GGGGGGNISS GAAIFDMEYT RWLDDDQRHM AELRKGLQSH  300
LSDGDLRVIV DSFVAHYDEI FQLKTVAAKS DVFHLITGMW TTPAERCFLW MGGFRPSELI  360
KMLSIQLDPL TEQQVVGIYS LQQSSQQAEE ALTQGLDQLH QSLVDTIASG SVNDGVHHMA  420
VALGKLTNLE GFVRQADNLR QQTLHQLHRI LTVRQAAKCF LVISEYYGRL RALSSLWASR  480
PREAMVSDEN SCQTTTDLQM VQSSHIHFSN FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein