PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024985490.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 497aa MW: 55269.8 Da PI: 6.8831

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024985490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.3e-10	194	229	5	40
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k rr+++NReAAr+sR+RKka++++Le L++ XP_024985490.1 194 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 229 7789************************86655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MASHRVGETG LSDSGPSHHH HHHQHLPYSV FPAFNPPNTG FINQEGSAFD FGELEEAIVL 60 QGYKIHSDET KLPLYTTVPR PAATLDMFPS WPMRVHQTPR GSNSSTDSGS AVNAAIASKP 120 ETHSHIEAES PISSNSRKAS SDPQQQQQEA IYRQQLQNLQ IPTQQLEMES EGGSPVTTGG 180 SSHSQQAPKP FSEKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIRLTQL EQDLQRARSQ 240 GMFLGGGGGG GNISSGAAIF DMEYTRWLDD DQRHMAELRK GLQSHLSDGD LRVIVDSFVA 300 HYDEIFQLKT VAAKSDVFHL ITGMWTTPAE RCFLWMGGFR PSELIKMLSI QLDPLTEQQV 360 VGIYSLQQSS QQAEEALTQG LDQLHQSLVD TIASGSVNDG VHHMAVALGK LTNLEGFVRQ 420 ADNLRQQTLH QLHRILTVRQ AAKCFLVISE YYGRLRALSS LWASRPREAM VSDENSCQTT 480 TDLQMVQSSH IHFSNFG

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MASHRVGETG LSDSGPSHHH HHHQHLPYSV FPAFNPPNTG FINQEGSAFD FGELEEAIVL  60
QGYKIHSDET KLPLYTTVPR PAATLDMFPS WPMRVHQTPR GSNSSTDSGS AVNAAIASKP  120
ETHSHIEAES PISSNSRKAS SDPQQQQQEA IYRQQLQNLQ IPTQQLEMES EGGSPVTTGG  180
SSHSQQAPKP FSEKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIRLTQL EQDLQRARSQ  240
GMFLGGGGGG GNISSGAAIF DMEYTRWLDD DQRHMAELRK GLQSHLSDGD LRVIVDSFVA  300
HYDEIFQLKT VAAKSDVFHL ITGMWTTPAE RCFLWMGGFR PSELIKMLSI QLDPLTEQQV  360
VGIYSLQQSS QQAEEALTQG LDQLHQSLVD TIASGSVNDG VHHMAVALGK LTNLEGFVRQ  420
ADNLRQQTLH QLHRILTVRQ AAKCFLVISE YYGRLRALSS LWASRPREAM VSDENSCQTT  480
TDLQMVQSSH IHFSNFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein