PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024985504.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 365aa    MW: 39641.5 Da    PI: 9.0265
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024985504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.5e-393292262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +e++l+cprCds ntkfCyynnysl+qPr+fCkaCrryWtkGGalrnvP+Gg++rknkk++
  XP_024985504.1 32 PEQTLRCPRCDSPNTKFCYYNNYSLTQPRHFCKACRRYWTKGGALRNVPIGGSCRKNKKTK 92
                    68899*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MLASKQANKD EEGQNSGGGG GGGRKTSSLR PPEQTLRCPR CDSPNTKFCY YNNYSLTQPR  60
HFCKACRRYW TKGGALRNVP IGGSCRKNKK TKSCSSRFLL GESSSRDSSS DMGGMKFYGL  120
SSMDFQLGGL NSFPPARVTT TNQFSSSYGD TSSIVNLDPL GFNFPISSSH FVMKQGDHHQ  180
QQQPQLNQSG GGLASFHEMG TSNHLHHHND LASSIESLSS INQDLHWKLQ QQRLSMLFGG  240
GGGGSGGGGE MDQQQQKKQA VLEPQVQRLQ PILFQNLETS KPTQSSMDGD SRKDTSTSGG  300
GGGGLATEWF FDSSYPPANL NQNPNPNLNR ATPTNSSTGN DQNGSINNWN GIQTWNHLNQ  360
YSSIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.14e-51Dof family protein