PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024985554.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 213aa    MW: 24279.1 Da    PI: 5.0409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024985554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-2080130255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ ng  +r++lg+f+ta +Aaka+++a+ +++g
  XP_024985554.1  80 HYRGVRRRP-WGKYAAEIRDPKRNG--ARVWLGTFDTAIGAAKAYDRAAFEMRG 130
                     6********.**********98776..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MATLDEVSAL QFIRHHLLDE YDNDTPDCPV FTSQTSISHH FESDFVIQFT VPESVDSRSG  60
KPHLEVDLKE TECVEEVEVH YRGVRRRPWG KYAAEIRDPK RNGARVWLGT FDTAIGAAKA  120
YDRAAFEMRG RKAILNFPLE IGSETVSCRK RSRDVEETVV VKKERITETG DEPSSWTAVW  180
DDDWCFSNIH PLSQLTVIRD QSRESGSILS TSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61600.13e-41ERF family protein