PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024985624.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 223aa    MW: 24406.4 Da    PI: 6.1641
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024985624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.2e-1853104156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+GVr +   ++Wv+e+r+p   +k++r++lg++ tae+Aa+a++ a+++l+g+
  XP_024985624.1  53 PVYRGVRMRN-PNKWVCEVREP---NKKTRIWLGTYPTAEMAARAHDVAALALRGN 104
                     68*****998.9******9998...347*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MDTPSPSSDP NSDGSHPSQS PNRTTRSDDG VILASAKPKK RAGRTKFKET RHPVYRGVRM  60
RNPNKWVCEV REPNKKTRIW LGTYPTAEMA ARAHDVAALA LRGNHACLNF ADSGWRLPVP  120
ATTDAAGIRK AAAEAAEAFR HVDMEVDNGE EKRDVVDGKS MVEEAVEVEV GSYMDEEAVF  180
HMPRLISDMA AGMMLPPPSC LGGWSSDDVG SPHADVSLWD FSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.12e-54ERF family protein