PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986283.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 283aa    MW: 31259.7 Da    PI: 8.5654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-1999149256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr++  +g+WvAeIr p++   r r++lg++ tae+Aa a+++a+ kl+ge
  XP_024986283.1  99 LYRGVRQRQ-WGKWVAEIRLPRN---RVRVWLGTYETAEMAAYAYDRAAYKLRGE 149
                     59****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MQENTINPFV IDSITDSVRS SLSNLILRGG NTSTLDSIFS HNSSSSGEGE VAAATGSSIY  60
LQQRDFIRKF SSNFDTSKQT TRSPIGLYQQ SNNLYKKKLY RGVRQRQWGK WVAEIRLPRN  120
RVRVWLGTYE TAEMAAYAYD RAAYKLRGEY ARLNFPNVKE PTDLGMIGDG GRLNALKTAV  180
DNKIQAICQK VRREEAKKKA ERESLKAAGN STAESGGGGD SCSGSDVGSS EERVWNWKCE  240
NSQSECSFSG ESTVAEEAET GGGWSLARMP SYDLDLIWAV LAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-46ERF family protein