PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986422.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 171aa    MW: 18202.9 Da    PI: 10.3298
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.2e-193973135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  XP_024986422.1 39 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 73
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGDLSDKGSE CDDMMNCKSS PERGGSSSSD GGSHTIKTCA DCGTTKTPLW RGGPAGPKSL  60
CNACGIRSRK KRRALLGISK DDKKAKKTMI TTTAPMTVTS TSGGDSQTSG LTTIKSSNMV  120
DFCLKRRLMA LGTEVVLQRP RSRVTKQRRK IGEEEQAAFL LMALSCGSVF A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.15e-32GATA family protein