PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986433.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 211aa    MW: 23656.9 Da    PI: 9.0369
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.7e-154897255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +    +Wv+eIr+ps+   + r++lg+f t+e+Aa+a +aa ++l+g
  XP_024986433.1 48 IYRGVRLRN-GTKWVCEIREPSK---KSRIWLGTFPTPEMAARAFDAATLSLRG 97
                    69****998.899*******965...6*********************999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MEIIEDDASS SSASSSSSSQ KDTNKIVVPP LMKRKAGRKK FKETRHPIYR GVRLRNGTKW  60
VCEIREPSKK SRIWLGTFPT PEMAARAFDA ATLSLRGDKS PLNFPDSAHL VRRAKSSSVR  120
DIQEVAMEAA IAFGPKRFEN SSVLASTSLR SEQVVVEVAE TAFVDEEVLF NMPSFYNSMA  180
EGLVITPPGM KKGFDWNDEF DSDIDLTLWR Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-55ERF family protein