PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986543.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 218aa    MW: 24877.8 Da    PI: 9.3825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.2e-17113163255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++ AeIrdp+ +g   r +lg+f++a eAaka+++a+ +++g
  XP_024986543.1 113 RYRGVRRRP-WGKYSAEIRDPKRRG--YRLWLGTFDSAIEAAKAYDRAAFNIRG 163
                     69*******.**********96554..************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MAALDKSEIP PPPPLDAFSN IELHDSLMSD FDFLNWSTQH VSDSSSSWSS SSSASPDYLH  60
SNQLNNTCHL RAFDDSINFS EFEFKPAEAI DLTVLVESNT PKRSRKMNDD QGRYRGVRRR  120
PWGKYSAEIR DPKRRGYRLW LGTFDSAIEA AKAYDRAAFN IRGRKAILNF PLEIEKNLTE  180
NAGVVKGRRK RSRETVEVER LENLVVKRER TVSVSPSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-36ERF family protein