PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986702.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 183aa    MW: 20359.7 Da    PI: 5.2836
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-201464155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+p   gk+ r++lg+f t+e+Aa+a++aa+ +l+g
  XP_024986702.1 14 SVYRGVRKRK-WGKWVSEIREP---GKNSRIWLGSFETPEMAAAAYDAAAFYLRG 64
                    78*****999.**********9...556*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MNGNRSNSGG GTSSVYRGVR KRKWGKWVSE IREPGKNSRI WLGSFETPEM AAAAYDAAAF  60
YLRGDVARLN FPERANGLPR PVNHSADCIR MAAQEAAVRF RPSMPEYEQD QGGSSSGHTV  120
PVNIGLSPSQ IQAINDSPLD SPKMWMELSD ALIADQKMYF SNTANFDHMG DWEEIPDYSL  180
WDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.13e-47ERF family protein