PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024986779.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 341aa MW: 37202 Da PI: 6.9185

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024986779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.7	3.5e-40	42	102	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ss XP_024986779.1 42 PEEALKCPRCDSSNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSS 102 6899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEVEMDVSGV HHHHHQQDMS SQTLESMLAC NKAQQDKKPR PPEEALKCPR CDSSNTKFCY 60 YNNYSLTQPR YFCKSCRRYW TKGGTLRNVP VGGGCRKNKR SSTLSSATSS NSSSSSALPK 120 IRGLAHLPYD STCTDLSLAF ARLQSQGNGH LGYDHFDHSD HHLGNNDPNS NHPLTPQGNH 180 LGFLDAIRGG FLENSTPNGF HNNMLYNGGN IGNGNLMGLN NGSSSNHDED QEIMNHQMFD 240 DHQEVPLMNN GNSSCGAATT AVTMTTVKQE TCNMMRSSDQ LGMGENRPGV LWGFPWQMGA 300 GGGGDQGNMI HEVESGGRSQ LGGWNGIGST TWHGLINSPL M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-39	Dof family protein