PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986839.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 343aa    MW: 37646.6 Da    PI: 5.0382
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-19129179155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa  +++a+ +l+g
  XP_024986839.1 129 KKFRGVRQRP-WGKWAAEIRDPM----RrVRLWLGTYNTAEEAAMVYDHAAIQLRG 179
                     59********.**********83....46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MAKPEIFDSV KFTEHKTHTT MVIKSAGDKP STREDMNAVA AGPRVVRISV TDAYATDSSG  60
DEKDDCLGRR RVRKFVNEVT IEARSRDDLI NRNGNGNRSL NRTASSRRKK VVGKSDATAE  120
KRLKVNAGKK FRGVRQRPWG KWAAEIRDPM RRVRLWLGTY NTAEEAAMVY DHAAIQLRGP  180
DALTNFTVPP PPPPPDKQPL SVSSGYNSGE DSHDHCINNK ATSPKSVLRF ASASTDESTA  240
ESTHNDAGNE ASEITGEEAA ASDNFSSFQP FDTPFSTSDL FDFPDIVPDI FDPTSLSGTP  300
FQASDPLDMF IDSAIDVGFG TWPVDDYFNE FGDIFGSDPL VSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.19e-52ERF family protein