PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986909.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 205aa    MW: 22481.7 Da    PI: 6.878
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.4e-054062123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_024986909.1 40 YTCTFCRREFRSAQALGGHMNVH 62
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MWNPNQPDAT SHEEDDSWEV RAFAEDTGNI MGTTWPPRSY TCTFCRREFR SAQALGGHMN  60
VHRRDRARLH QSQPNSKNLY NISSSNSSSS STLLIPTQEL VGNGGLCLLY SLPTSNALFS  120
PLKTFTDNPS SFLSIAPHPT TANLMNFPAA VPPHNIQSSP SNSSNTEASM STNNHNNRVT  180
LTTSEVAEID LELRLGRSRS SSSPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.18e-37C2H2 family protein