PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986920.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family EIL
Protein Properties Length: 435aa    MW: 49769.4 Da    PI: 6.1655
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3346.36.5e-106453491311
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     +e ++r w d+m lkr+k  +k       + ++      +++q+rr+kmsra D+iLkY lk+mevc+aqGfvYgiipekgkp +g+s+sLr+WW
  XP_024986920.1  45 DEFNRRLWHDRMHLKRMKPAEKV------V-ADG----SREQQSRRRKMSRAHDAILKYVLKIMEVCKAQGFVYGIIPEKGKPITGSSESLRKWW 128
                     6999***********76666654......2.222....46789**************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXX...XXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.- CS
            EIN3  96 kekvefdrngpaaiskyqaknlils...gesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.l 186
                     ke+  fd+ngp a+s+y +  ++++   ge + + ++ss+   l++lqDTtlgS+ salmqhc ppqr fp ekg++pPWWPtGke wwg +g +
  XP_024986920.1 129 KEEACFDQNGPLAVSEYHSTMAAVEqcdGEPEPDPNPSSYIYLLQDLQDTTLGSIISALMQHCVPPQRGFPFEKGLNPPWWPTGKEFWWGDQGtT 223
                     *****************444444430103333356899999****************************************************99 PP

                     -TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXXX CS
            EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrkqspkvtlsceq 280
                      k +g+ppy+kphdlkkawkvs+L+a +khm+p+i++ir+l++qsk+lqdkm+akes ++++v+nqee +++  + h++ + +  +p+v+ ++ +
  XP_024986920.1 224 VKGHGPPPYRKPHDLKKAWKVSLLAAIMKHMAPNIDHIRRLAMQSKCLQDKMTAKESVIWSKVVNQEETLLNLAQNHQEiEPEPPEPDVFKNSIE 318
                     99999****************************************************************99877777664555588888888888 PP

                     XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXX CS
            EIN3 281 kedvegkkeskikhvqavkttagfpvvrkrk 311
                      e+   kk s  ++++ +  + + ++ ++rk
  XP_024986920.1 319 GEETLLKKLSPNQKIEPELDHFKNSMEERRK 349
                     8887766666644444333322333333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MNAQVPSPPT FIASASCDAN AMNLSISTKT TTFLRSQVVE ETSSDEFNRR LWHDRMHLKR  60
MKPAEKVVAD GSREQQSRRR KMSRAHDAIL KYVLKIMEVC KAQGFVYGII PEKGKPITGS  120
SESLRKWWKE EACFDQNGPL AVSEYHSTMA AVEQCDGEPE PDPNPSSYIY LLQDLQDTTL  180
GSIISALMQH CVPPQRGFPF EKGLNPPWWP TGKEFWWGDQ GTTVKGHGPP PYRKPHDLKK  240
AWKVSLLAAI MKHMAPNIDH IRRLAMQSKC LQDKMTAKES VIWSKVVNQE ETLLNLAQNH  300
QEIEPEPPEP DVFKNSIEGE ETLLKKLSPN QKIEPELDHF KNSMEERRKN TDRCLYHAND  360
DGHGAISWMN MIETTEKEHS KEKECGYGNF WDVYERIGMN EGTMDLNVIP FDQRELRIDQ  420
GTSIWDLGYE SPGLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17782SRRRKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-111EIL family protein