PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024987131.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family NF-YA
Protein Properties Length: 288aa    MW: 31697.8 Da    PI: 6.7449
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024987131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.15.2e-32133189158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR R+sgGrF
  XP_024987131.1 133 QEPVYVNAKQYHAILRRRQSRAKAELEKKL-IKDRKPYLHESRHQHAMRRVRSSGGRF 189
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSSTAMQANS ADSSSPEQSL DRDSQSDEVL SEEEDDVSKE THDVPYFPSV SDSYGQGQQN  60
FQHGAPNILP RNEETVAQAP QPELVGHSVA CASNPYYDPY YGGMMAAYSQ HLVHPQFLDM  120
HQVRMPLPLE MAQEPVYVNA KQYHAILRRR QSRAKAELEK KLIKDRKPYL HESRHQHAMR  180
RVRSSGGRFA KKTETNASED KKATGSGASG MKRMQSGQSG ESFSETRGGV VNSCNGRTYA  240
VDGGGRYDNQ DGFQGSSYHS DIGEGGSLGQ QWATMPANQG SQRAVAMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-58NF-YA family protein