PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024987530.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 206aa    MW: 22623.4 Da    PI: 7.4598
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024987530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000135173123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_024987530.1 51 YSCSFCRREFRSAQALGGHMNVH 73
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MEQYSQYLML AKSKNNKILM NPLSSYSWEE QAFAQDARGP LGGFVWPPRS YSCSFCRREF  60
RSAQALGGHM NVHRRERAKL KQTVNGTSSA PISTTSTITQ QNHNKQSLCN SSLESLDPDT  120
PSLIPALGQE SLDSNSDTKS CVYDEVLVVA QGNGTDVETN LFLGFDHLDS CSNTTSSVHK  180
RQKMAVTPPV MAGSMKGLDL ELRLAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17482RRERAKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.18e-26C2H2 family protein