PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024987570.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family VOZ
Protein Properties Length: 485aa    MW: 53778.6 Da    PI: 5.5533
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024987570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ400.73.1e-1232084321217
             VOZ   1 pppsaflgpkcalwdctrpa.qg.......sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 
                     pppsaflgpkcalwdc+rpa qg       + w+ dycss+ha++a neg  g+tpv+rpkgi+lkd+llfaalsak qgk+vg+pecegaatak
  XP_024987570.1 208 PPPSAFLGPKCALWDCPRPAtQGwcserpvQGWFPDYCSSLHAAIAQNEGRFGMTPVIRPKGIELKDTLLFAALSAKFQGKDVGVPECEGAATAK 302
                     89*****************844544333334699************************************************************* PP

             VOZ  88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182
                     spwna+elfdls++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++e g lkrsyymdpqp++ +ewhlyeyei+++da+al
  XP_024987570.1 303 SPWNAPELFDLSVFEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINESGWLKRSYYMDPQPMKFLEWHLYEYEISKCDACAL 397
                     *********************************************************************************************** PP

             VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217
                     yrlelklvd+kks+kgk+++ds+adlqk++grlta
  XP_024987570.1 398 YRLELKLVDGKKSPKGKIANDSVADLQKQMGRLTA 432
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MGKGTKCKLG SHQIFKDRAK NRVEDLHGMF TDLQSARKES RSIDVVVLEE QVNQMLKEWK  60
NELNEPSPAS SLQQQGASVG PFSPDISRLL QLCDEEDDAT SGLAAPKPDP DCHKAGESAA  120
FHEDFAVTQT GQEQGFQLVG QCKGSASGVN NIGVHNMGVA TATQLDYFSY DLPQDFEQNF  180
FSGFDGMGLC RGEDALPQMT GFMPTVCPPP SAFLGPKCAL WDCPRPATQG WCSERPVQGW  240
FPDYCSSLHA AIAQNEGRFG MTPVIRPKGI ELKDTLLFAA LSAKFQGKDV GVPECEGAAT  300
AKSPWNAPEL FDLSVFEGET IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVI  360
NESGWLKRSY YMDPQPMKFL EWHLYEYEIS KCDACALYRL ELKLVDGKKS PKGKIANDSV  420
ADLQKQMGRL TAEFPLENNI KRSGKGRGKK ENSSKPIIAA NDGIDYGGNA AFNYLVDDVG  480
GYYLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0VOZ family protein