PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024987574.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family VOZ
Protein Properties Length: 484aa    MW: 53650.4 Da    PI: 5.5533
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024987574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ400.73e-1232074311217
             VOZ   1 pppsaflgpkcalwdctrpa.qg.......sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 
                     pppsaflgpkcalwdc+rpa qg       + w+ dycss+ha++a neg  g+tpv+rpkgi+lkd+llfaalsak qgk+vg+pecegaatak
  XP_024987574.1 207 PPPSAFLGPKCALWDCPRPAtQGwcserpvQGWFPDYCSSLHAAIAQNEGRFGMTPVIRPKGIELKDTLLFAALSAKFQGKDVGVPECEGAATAK 301
                     89*****************844544333334699************************************************************* PP

             VOZ  88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182
                     spwna+elfdls++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++e g lkrsyymdpqp++ +ewhlyeyei+++da+al
  XP_024987574.1 302 SPWNAPELFDLSVFEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINESGWLKRSYYMDPQPMKFLEWHLYEYEISKCDACAL 396
                     *********************************************************************************************** PP

             VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217
                     yrlelklvd+kks+kgk+++ds+adlqk++grlta
  XP_024987574.1 397 YRLELKLVDGKKSPKGKIANDSVADLQKQMGRLTA 431
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    
MGKGTKCKLG SHQIFKDRAK NRVEDLHGMF TDLQSARKES RSIDVVVLEE QVNQMLKEWK  60
NELNEPSPAS SLQQGASVGP FSPDISRLLQ LCDEEDDATS GLAAPKPDPD CHKAGESAAF  120
HEDFAVTQTG QEQGFQLVGQ CKGSASGVNN IGVHNMGVAT ATQLDYFSYD LPQDFEQNFF  180
SGFDGMGLCR GEDALPQMTG FMPTVCPPPS AFLGPKCALW DCPRPATQGW CSERPVQGWF  240
PDYCSSLHAA IAQNEGRFGM TPVIRPKGIE LKDTLLFAAL SAKFQGKDVG VPECEGAATA  300
KSPWNAPELF DLSVFEGETI REWLFFDKPR RAFESGNRKQ RSLPDYNGRG WHESRKQVIN  360
ESGWLKRSYY MDPQPMKFLE WHLYEYEISK CDACALYRLE LKLVDGKKSP KGKIANDSVA  420
DLQKQMGRLT AEFPLENNIK RSGKGRGKKE NSSKPIIAAN DGIDYGGNAA FNYLVDDVGG  480
YYLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0VOZ family protein