PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024987849.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 231aa    MW: 25404.5 Da    PI: 10.0783
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024987849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23e-212677156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  XP_024987849.1 26 PHFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 77
                    689*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MAPKERSAGA GKPNTTGVGG VSLKEPHFRG VRKRPWGRYA AEIRDPGKKS RVWLGTFDTA  60
EEAARAYDAA AREFRGAKAK TNFPTHEDVG LFKVQRSPSQ TSTVESPSHP EPVVPLLDLN  120
LSYSVPPPFV VHFPYHHQNQ HRFSKVPGAG FYSPPANQMV YFDGIHITNC DRSPVIFRQS  180
SSASKSDDSN SSTVVNLKPS PPPRRIAIDL NFPPPAEGLD IDLNHQIVNS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.18e-25ERF family protein