PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024987910.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 145aa MW: 16258.3 Da PI: 8.8514

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024987910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.6	5.4e-08	60	98	13	51
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 NR+A +++R++Kka+ + Lee+vk+L N+ L+ +l+ XP_024987910.1 60 NRVAVKKYREKKKAQNAYLEEEVKKLRVVNRGLIRKLQL 98 **********************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MDDGEVELSD PLTGNSSNTF RAPLKLEDPV LNDSLKNRRT CRQTHPDHHD SVEPGRPSGN 60 RVAVKKYREK KKAQNAYLEE EVKKLRVVNR GLIRKLQLQA DLELEAVRLR RLLLDLKARI 120 DAEMGGSPFY KQSCNGSSDG CSGGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51960.1	1e-13	bZIP family protein