PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988156.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 295aa    MW: 32799.1 Da    PI: 4.9231
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-3075133259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v +tY+ +Hnh+
  XP_024988156.1  75 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMVMVTYSCDHNHP 133
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MAHGFTSLMV DQEDHENSPE NSEDSPSSGM FNDTKTTSTS SPKRSRRSIQ KRVVSVPIRE  60
IEGSRLKGET NAPPSDSWAW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRADPT  120
MVMVTYSCDH NHPWPASRNN NHHHNSTVSP PPASTATITE EAPVSNTDDI DQEEDQDPPH  180
DLSKPSTAEP DEKFTSLEVG PGASFITTTD GFGWFSDLES TSSTMLESPL MMAGDMVGDA  240
DMAMIFSIRE EDESLFADLG ELPECTTVFR RREVINEEEH HRRPCKLAPW CGTKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-66WRKY family protein