PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988157.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 294aa    MW: 32712 Da    PI: 4.9231
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-3074132259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v +tY+ +Hnh+
  XP_024988157.1  74 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMVMVTYSCDHNHP 132
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAHGFTSLMV DQEDHENSPE NSEDSPSSGM FNDTKTTSTS SPKRRRSIQK RVVSVPIREI  60
EGSRLKGETN APPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRADPTM  120
VMVTYSCDHN HPWPASRNNN HHHNSTVSPP PASTATITEE APVSNTDDID QEEDQDPPHD  180
LSKPSTAEPD EKFTSLEVGP GASFITTTDG FGWFSDLEST SSTMLESPLM MAGDMVGDAD  240
MAMIFSIREE DESLFADLGE LPECTTVFRR REVINEEEHH RRPCKLAPWC GTKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-66WRKY family protein