PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988240.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 168aa    MW: 19437.6 Da    PI: 10.34
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0017999121
                    EEETTTTEEESSHHHHHHHHH CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                    ++C  C + F +  +Lk H  
  XP_024988240.1 79 FVCMVCRMAFATVFHLKMHGE 99
                    89*****************65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEEEMISLRN IMPVELAIKR ELEYRKKMDV SRNQRQNDLK PLVLTQVSVL QSQRRVEQKR  60
KVQPYNAQSS RTLMSSTRFV CMVCRMAFAT VFHLKMHGET FVHRNKVYLS RKGGENVSNP  120
FVCELCDVSC STGRDMEFHV AGLKHAACFQ KFVDAKRARI HGNLASNQ