PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988606.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 330aa    MW: 36676.8 Da    PI: 6.4472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-16224274255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++ Ae r p +     r +lg++ t+eeAa a+++a+ k +g
  XP_024988606.1 224 RYRGVRQRP-WGKFTAEMRNPEKK--GSRLWLGTYETPEEAAMAYDRAAFKHRG 274
                     59*******.*******9997443..4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MSMQLDSNLH ILEFIRNHLL FDDLLQTFPG DNYQHPFSCS NFNTDEQRVL EGSHESSISM  60
EEKSSFFAAV CSSNSSDSLI CPNIMDDQVQ DLVNLNDFNI PSINLDDHGV GIHPVANSSH  120
SHHSNPQVFP NTNIELAEIP TISEEIQPEV SPATFTSLPS ISYSTERAVN KPLNWDFSTG  180
HVVAIGDGVV SGDKDNRAPP TVKEVLSDGV DNQAQRLPSL PGMRYRGVRQ RPWGKFTAEM  240
RNPEKKGSRL WLGTYETPEE AAMAYDRAAF KHRGSQALLN FPHLIGKHKE IPKKLVTRKR  300
SSTTLEPSSS SSSSESSRNK SSKRRITCGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-35ERF family protein